Entry Detail



General Information

Database ID:SKCM04403
Cancer Type:melanoma
Dataset:GSE38495
CTCs/CTM Isolation Method:immunomagnetic purification



Gene Information

ncRNA Symbol:OPTN
Full Name:optineurin
Category:mRNA
Synonyms:ALS12|FIP2|GLC1E|HIP7|HYPL|NRP|TFIIIA-INTP
Chromosome:chr10
Strand:+
Coordinate:
Start Site(bp):13099449End Site(bp):13138308
Gene Summary:This gene encodes the coiled-coil containing protein optineurin. Optineurin may play a role in normal-tension glaucoma and adult-onset primary open angle glaucoma. Optineurin interacts with adenovirus E3-14.7K protein and may utilize tumor necrosis factor-alpha or Fas-ligand pathways to mediate apoptosis, inflammation or vasoconstriction. Optineurin may also function in cellular morphogenesis and membrane trafficking, vesicle trafficking, and transcription activation through its interactions with the RAB8, huntingtin, and transcription factor IIIA proteins. Alternative splicing results in multiple transcript variants encoding the same protein. [provided by RefSeq, Jul 2008]
External Links:
Ensembl ID:ENSG00000123240
HGNC ID:HGNC:17142
Entrez Gene:10133



Expression Profile of OPTN Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-182-5p
YES
YES
NO
hsa-miR-199a-5p
YES
YES
NO
hsa-miR-199b-5p
YES
YES
NO
hsa-miR-342-3p
YES
YES
NO
hsa-miR-377-3p
YES
YES
NO
Display: