ctcRbase

Entry Detail

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General Information

Database ID: SKCM04506 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: TAF1B Full Name: TATA-box binding protein associated factor, RNA polymerase I subunit B Category: mRNA Synonyms: MGC:9349|RAF1B|RAFI63|SL1|TAFI63 Chromosome: chr2 Strand: + Coordinate: Start Site(bp): 9843354 End Site(bp): 9934416 Gene Summary: Initiation of transcription by RNA polymerase I requires the formation of a complex composed of the TATA-binding protein (TBP) and three TBP-associated factors (TAFs) specific for RNA polymerase I. This complex, known as SL1, binds to the core promoter of ribosomal RNA genes to position the polymerase properly and acts as a channel for regulatory signals. This gene encodes one of the SL1-specific TAFs. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jan 2016] External Links: Ensembl ID: ENSG00000115750 HGNC ID: HGNC:11533 Entrez Gene: 9014

Expression Profile of TAF1B Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1-3p YES YES NO hsa-miR-200b-3p YES YES NO hsa-miR-200c-3p YES YES NO hsa-miR-206 YES YES NO hsa-miR-326 YES YES NO hsa-miR-330-5p YES YES NO hsa-miR-429 YES YES NO hsa-miR-613 YES YES NO Display: