ctcRbase

Entry Detail

---



General Information

Database ID: SKCM04515 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: TRIO Full Name: trio Rho guanine nucleotide exchange factor Category: mRNA Synonyms: ARHGEF23|MEBAS|MRD44|tgat Chromosome: chr5 Strand: + Coordinate: Start Site(bp): 14143702 End Site(bp): 14532128 Gene Summary: This gene encodes a large protein that functions as a GDP to GTP exchange factor. This protein promotes the reorganization of the actin cytoskeleton, thereby playing a role in cell migration and growth. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2015] External Links: Ensembl ID: ENSG00000038382 HGNC ID: HGNC:12303 Entrez Gene: 7204

Expression Profile of TRIO Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES NO YES hsa-miR-129-5p YES YES YES hsa-miR-132-3p YES YES NO hsa-miR-140-5p YES YES YES hsa-miR-144-3p YES YES YES hsa-miR-153-3p YES YES YES hsa-miR-190a-5p YES YES YES hsa-miR-190b YES YES YES hsa-miR-200b-3p YES YES YES hsa-miR-200c-3p YES YES YES hsa-miR-212-3p YES YES NO hsa-miR-25-3p YES YES YES hsa-miR-300 YES YES YES hsa-miR-32-5p YES YES YES hsa-miR-363-3p YES YES YES hsa-miR-367-3p YES YES YES hsa-miR-381-3p YES YES YES hsa-miR-429 YES YES YES hsa-miR-448 YES YES NO hsa-miR-873-5p YES YES NO hsa-miR-92a-3p YES YES YES hsa-miR-92b-3p YES YES YES Display: