ctcRbase

Entry Detail

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General Information

Database ID: SKCM04567 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SYNGR1 Full Name: synaptogyrin 1 Category: mRNA Synonyms: - Chromosome: chr22 Strand: + Coordinate: Start Site(bp): 39349925 End Site(bp): 39385588 Gene Summary: This gene encodes an integral membrane protein associated with presynaptic vesicles in neuronal cells. The exact function of this protein is unclear, but studies of a similar murine protein suggest that it functions in synaptic plasticity without being required for synaptic transmission. The gene product belongs to the synaptogyrin gene family. Three alternatively spliced variants encoding three different isoforms have been identified. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000100321 HGNC ID: HGNC:11498 Entrez Gene: 9145

Expression Profile of SYNGR1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-103a-3p YES NO YES hsa-miR-107 YES NO YES hsa-miR-197-3p YES YES NO hsa-miR-22-3p YES YES NO hsa-miR-224-5p YES NO YES hsa-miR-329-3p YES NO NO hsa-miR-362-3p YES NO NO hsa-miR-425-5p YES YES NO Display: