ctcRbase

Entry Detail

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General Information

Database ID: SKCM04585 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: ATF7IP Full Name: activating transcription factor 7 interacting protein Category: mRNA Synonyms: AM|ATF-IP|MCAF|MCAF1|p621 Chromosome: chr12 Strand: + Coordinate: Start Site(bp): 14365632 End Site(bp): 14502935 Gene Summary: ATF7IP is a multifunctional nuclear protein that associates with heterochromatin. It can act as a transcriptional coactivator or corepressor depending upon its binding partners (summary by Liu et al., 2009 [PubMed 19106100]).[supplied by OMIM, Nov 2010] External Links: Ensembl ID: ENSG00000171681 HGNC ID: HGNC:20092 Entrez Gene: 55729

Expression Profile of ATF7IP Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES YES NO hsa-let-7b-5p YES YES NO hsa-let-7c-5p YES YES NO hsa-let-7d-5p YES YES NO hsa-let-7e-5p YES YES NO hsa-let-7f-5p YES YES NO hsa-let-7g-5p YES YES NO hsa-let-7i-5p YES YES NO hsa-miR-124-3p YES YES YES hsa-miR-129-5p YES YES NO hsa-miR-142-3p YES YES YES hsa-miR-340-5p YES YES YES hsa-miR-506-3p YES YES NO hsa-miR-876-5p YES NO YES hsa-miR-98-5p YES YES NO Display: