ctcRbase

Entry Detail

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General Information

Database ID: SKCM04599 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: ASB6 Full Name: ankyrin repeat and SOCS box containing 6 Category: mRNA Synonyms: - Chromosome: chr9 Strand: - Coordinate: Start Site(bp): 129634604 End Site(bp): 129642169 Gene Summary: The protein encoded by this gene belongs to a family of ankyrin repeat proteins that, along with four other protein families, contain a C-terminal SOCS box motif. Growing evidence suggests that the SOCS box, similar to the F-box, acts as a bridge between specific substrate-binding domains and the more generic proteins that comprise a large family of E3 ubiquitin protein ligases. Alternatively spliced transcript variants have been identified for this gene. [provided by RefSeq, Jan 2011] External Links: Ensembl ID: ENSG00000148331 HGNC ID: HGNC:17181 Entrez Gene: 140459

Expression Profile of ASB6 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1271-5p YES NO YES hsa-miR-15a-5p YES NO YES hsa-miR-15b-5p YES NO YES hsa-miR-16-5p YES NO YES hsa-miR-194-5p YES YES NO hsa-miR-195-5p YES NO YES hsa-miR-214-3p YES NO NO hsa-miR-223-3p YES YES NO hsa-miR-22-3p YES NO YES hsa-miR-296-3p YES YES NO hsa-miR-299-3p YES YES NO hsa-miR-34c-5p YES YES NO hsa-miR-371a-5p YES NO YES hsa-miR-374a-5p YES YES NO hsa-miR-374b-5p YES YES NO hsa-miR-424-5p YES NO YES hsa-miR-449a YES YES NO hsa-miR-449b-5p YES YES NO hsa-miR-490-3p YES YES NO hsa-miR-497-5p YES NO YES hsa-miR-760 YES NO YES hsa-miR-96-5p YES NO YES Display: