ctcRbase

Entry Detail

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General Information

Database ID: SKCM04669 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: PAN2 Full Name: poly(A) specific ribonuclease subunit PAN2 Category: mRNA Synonyms: USP52 Chromosome: chr12 Strand: - Coordinate: Start Site(bp): 56316223 End Site(bp): 56334053 Gene Summary: This gene encodes a deadenylase that functions as the catalytic subunit of the polyadenylate binding protein dependent poly(A) nuclease complex. The encoded protein is a magnesium dependent 3' to 5' exoribonuclease that is involved in the degradation of cytoplasmic mRNAs. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Oct 2009] External Links: Ensembl ID: ENSG00000135473 HGNC ID: HGNC:20074 Entrez Gene: 9924

Expression Profile of PAN2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-125a-5p YES YES YES hsa-miR-125b-5p YES YES YES hsa-miR-1-3p YES YES NO hsa-miR-141-3p YES YES YES hsa-miR-145-5p YES YES YES hsa-miR-149-5p YES YES YES hsa-miR-182-5p YES NO YES hsa-miR-186-5p YES YES NO hsa-miR-200a-3p YES YES YES hsa-miR-206 YES YES NO hsa-miR-214-3p YES YES NO hsa-miR-28-5p YES YES NO hsa-miR-29a-3p YES YES YES hsa-miR-29b-3p YES YES YES hsa-miR-29c-3p YES YES YES hsa-miR-340-5p YES YES YES hsa-miR-495-3p YES YES NO hsa-miR-613 YES YES NO hsa-miR-665 YES NO YES hsa-miR-708-5p YES YES NO hsa-miR-7-5p YES YES YES Display: