ctcRbase

Entry Detail

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General Information

Database ID: SKCM04695 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SC5D Full Name: sterol-C5-desaturase Category: mRNA Synonyms: ERG3|S5DES|SC5DL Chromosome: chr11 Strand: + Coordinate: Start Site(bp): 121292453 End Site(bp): 121308694 Gene Summary: This gene encodes an enzyme of cholesterol biosynthesis. The encoded protein catalyzes the conversion of lathosterol into 7-dehydrocholesterol. Mutations in this gene have been associated with lathosterolosis. Alternatively spliced transcript variants encoding the same protein have been described. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000109929 HGNC ID: HGNC:10547 Entrez Gene: 6309

Expression Profile of SC5D Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1271-5p YES YES NO hsa-miR-129-5p YES YES NO hsa-miR-136-5p YES YES NO hsa-miR-142-3p YES YES NO hsa-miR-182-5p YES YES YES hsa-miR-21-5p YES YES NO hsa-miR-221-3p YES YES NO hsa-miR-222-3p YES YES NO hsa-miR-23a-3p YES YES NO hsa-miR-23b-3p YES YES NO hsa-miR-26a-5p YES YES NO hsa-miR-26b-5p YES YES NO hsa-miR-300 YES YES NO hsa-miR-361-5p YES YES YES hsa-miR-381-3p YES YES NO hsa-miR-448 YES YES NO hsa-miR-485-5p YES YES NO hsa-miR-532-5p YES NO YES hsa-miR-590-5p YES YES NO hsa-miR-7-5p YES YES NO hsa-miR-96-5p YES YES NO Display: