ctcRbase

Entry Detail

---



General Information

Database ID: SKCM04719 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: NCOA5 Full Name: nuclear receptor coactivator 5 Category: mRNA Synonyms: CIA|bA465L10.6 Chromosome: chr20 Strand: - Coordinate: Start Site(bp): 46060985 End Site(bp): 46089952 Gene Summary: This gene encodes a coregulator for the alpha and beta estrogen receptors and the orphan nuclear receptor NR1D2. The protein localizes to the nucleus, and is thought to have both coactivator and corepressor functions. Its interaction with nuclear receptors is independent of the AF2 domain on the receptors, which is known to regulate interaction with other coreceptors. Several alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Jan 2017] External Links: Ensembl ID: ENSG00000124160 HGNC ID: HGNC:15909 Entrez Gene: 57727

Expression Profile of NCOA5 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-24-3p YES YES NO hsa-miR-300 YES YES NO hsa-miR-335-5p YES YES NO hsa-miR-370-3p YES YES YES hsa-miR-381-3p YES YES NO hsa-miR-410-3p YES YES YES hsa-miR-425-5p YES YES NO hsa-miR-486-5p YES YES NO hsa-miR-579-3p YES NO NO Display: