Entry Detail



General Information

Database ID:SKCM04811
Cancer Type:melanoma
Dataset:GSE38495
CTCs/CTM Isolation Method:immunomagnetic purification



Gene Information

ncRNA Symbol:PDHX
Full Name:pyruvate dehydrogenase complex component X
Category:mRNA
Synonyms:DLDBP|E3BP|OPDX|PDHXD|PDX1|proX
Chromosome:chr11
Strand:+
Coordinate:
Start Site(bp):34915829End Site(bp):35020591
Gene Summary:The pyruvate dehydrogenase (PDH) complex is located in the mitochondrial matrix and catalyzes the conversion of pyruvate to acetyl coenzyme A. The PDH complex thereby links glycolysis to Krebs cycle. The PDH complex contains three catalytic subunits, E1, E2, and E3, two regulatory subunits, E1 kinase and E1 phosphatase, and a non-catalytic subunit, E3 binding protein (E3BP). This gene encodes the E3 binding protein subunit; also known as component X of the pyruvate dehydrogenase complex. This protein tethers E3 dimers to the E2 core of the PDH complex. Defects in this gene are a cause of pyruvate dehydrogenase deficiency which results in neurological dysfunction and lactic acidosis in infancy and early childhood. This protein is also a minor antigen for antimitochondrial antibodies. These autoantibodies are present in nearly 95% of patients with the autoimmune liver disease primary biliary cirrhosis (PBC). In PBC, activated T lymphocytes attack and destroy epithelial cells in the bile duct where this protein is abnormally distributed and overexpressed. PBC eventually leads to cirrhosis and liver failure. Alternative splicing results in multiple transcript variants encoding distinct isoforms.[provided by RefSeq, Oct 2009]
External Links:
Ensembl ID:ENSG00000110435
HGNC ID:HGNC:21350
Entrez Gene:8050



Expression Profile of PDHX Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-128-3p
YES
YES
YES
hsa-miR-129-5p
YES
YES
NO
hsa-miR-1297
YES
YES
YES
hsa-miR-135a-5p
YES
YES
YES
hsa-miR-135b-5p
YES
YES
YES
hsa-miR-181a-5p
YES
YES
YES
hsa-miR-181b-5p
YES
YES
YES
hsa-miR-181c-5p
YES
YES
YES
hsa-miR-181d-5p
YES
YES
YES
hsa-miR-204-5p
YES
YES
NO
hsa-miR-211-5p
YES
YES
NO
hsa-miR-26a-5p
YES
YES
YES
hsa-miR-26b-5p
YES
YES
YES
hsa-miR-27a-3p
YES
YES
YES
hsa-miR-27b-3p
YES
YES
YES
hsa-miR-29a-3p
YES
YES
YES
hsa-miR-29b-3p
YES
YES
YES
hsa-miR-29c-3p
YES
YES
YES
hsa-miR-371a-5p
YES
YES
NO
hsa-miR-382-5p
YES
YES
NO
hsa-miR-384
YES
YES
NO
hsa-miR-409-3p
YES
NO
YES
hsa-miR-410-3p
YES
YES
NO
hsa-miR-487a-3p
YES
NO
YES
hsa-miR-520f-3p
YES
NO
YES
hsa-miR-543
YES
YES
NO
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