ctcRbase

Entry Detail

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General Information

Database ID: SKCM04834 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SNX7 Full Name: sorting nexin 7 Category: mRNA Synonyms: - Chromosome: chr1 Strand: + Coordinate: Start Site(bp): 98661701 End Site(bp): 98760500 Gene Summary: This gene encodes a member of the sorting nexin family. Members of this family contain a phox (PX) domain, which is a phosphoinositide binding domain, and are involved in intracellular trafficking. This protein does not contain a coiled coil region like some family members, and its exact function is unknown. Alternative splicing results in multiple transcript variants. A related pseudogene has been identified on chromosome 11. [provided by RefSeq, Jun 2010] External Links: Ensembl ID: ENSG00000162627 HGNC ID: HGNC:14971 Entrez Gene: 51375

Expression Profile of SNX7 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1271-5p YES YES NO hsa-miR-128-3p YES YES NO hsa-miR-132-3p YES YES NO hsa-miR-150-5p YES YES NO hsa-miR-182-5p YES YES NO hsa-miR-183-5p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-212-3p YES YES NO hsa-miR-223-3p YES YES NO hsa-miR-9-5p YES YES YES hsa-miR-96-5p YES YES NO Display: