ctcRbase

Entry Detail

---



General Information

Database ID: SKCM04837 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SH3GL1 Full Name: SH3 domain containing GRB2 like 1, endophilin A2 Category: mRNA Synonyms: CNSA1|EEN|SH3D2B|SH3P8 Chromosome: chr19 Strand: - Coordinate: Start Site(bp): 4360370 End Site(bp): 4400547 Gene Summary: This gene encodes a member of the endophilin family of Src homology 3 domain-containing proteins. The encoded protein is involved in endocytosis and may also play a role in the cell cycle. Overexpression of this gene may play a role in leukemogenesis, and the encoded protein has been implicated in acute myeloid leukemia as a fusion partner of the myeloid-lymphoid leukemia protein. Pseudogenes of this gene are located on the long arm of chromosomes 11 and 17. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Jan 2011] External Links: Ensembl ID: ENSG00000141985 HGNC ID: HGNC:10830 Entrez Gene: 6455

Expression Profile of SH3GL1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-138-5p YES NO YES hsa-miR-1-3p YES NO YES hsa-miR-184 YES YES NO hsa-miR-200b-3p YES NO YES hsa-miR-200c-3p YES NO YES hsa-miR-206 YES NO YES hsa-miR-320a YES YES NO hsa-miR-320b YES YES NO hsa-miR-320c YES YES NO hsa-miR-320d YES YES NO hsa-miR-33a-5p YES YES NO hsa-miR-33b-5p YES YES NO hsa-miR-429 YES NO YES hsa-miR-613 YES NO YES hsa-miR-655-3p YES NO YES hsa-miR-874-3p YES YES NO Display: