Entry Detail



General Information

Database ID:SKCM04889
Cancer Type:melanoma
Dataset:GSE38495
CTCs/CTM Isolation Method:immunomagnetic purification



Gene Information

ncRNA Symbol:APEX2
Full Name:apurinic/apyrimidinic endodeoxyribonuclease 2
Category:mRNA
Synonyms:APE2|APEXL2|XTH2|ZGRF2
Chromosome:chrX
Strand:+
Coordinate:
Start Site(bp):55000357End Site(bp):55009057
Gene Summary:Apurinic/apyrimidinic (AP) sites occur frequently in DNA molecules by spontaneous hydrolysis, by DNA damaging agents or by DNA glycosylases that remove specific abnormal bases. AP sites are pre-mutagenic lesions that can prevent normal DNA replication so the cell contains systems to identify and repair such sites. Class II AP endonucleases cleave the phosphodiester backbone 5' to the AP site. This gene encodes a protein shown to have a weak class II AP endonuclease activity. Most of the encoded protein is located in the nucleus but some is also present in mitochondria. This protein may play an important role in both nuclear and mitochondrial base excision repair. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Nov 2012]
External Links:
Ensembl ID:ENSG00000169188
HGNC ID:HGNC:17889
Entrez Gene:27301



Expression Profile of APEX2 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-124-3p
YES
YES
YES
hsa-miR-28-5p
YES
YES
NO
hsa-miR-338-3p
YES
YES
NO
hsa-miR-377-3p
YES
YES
NO
hsa-miR-506-3p
YES
YES
NO
hsa-miR-708-5p
YES
YES
NO
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