ctcRbase

Entry Detail

---



General Information

Database ID: SKCM04962 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: CPEB1 Full Name: cytoplasmic polyadenylation element binding protein 1 Category: mRNA Synonyms: CPE-BP1|CPEB|CPEB-1|h-CPEB|hCPEB-1 Chromosome: chr15 Strand: - Coordinate: Start Site(bp): 82543201 End Site(bp): 82648861 Gene Summary: This gene encodes a member of the cytoplasmic polyadenylation element binding protein family. This highly conserved protein binds to a specific RNA sequence, called the cytoplasmic polyadenylation element, found in the 3' untranslated region of some mRNAs. The encoded protein functions in both the cytoplasm and the nucleus. It is involved in the regulation of mRNA translation, as well as processing of the 3' untranslated region, and may play a role in cell proliferation and tumorigenesis. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jan 2014] External Links: Ensembl ID: ENSG00000214575 HGNC ID: HGNC:21744 Entrez Gene: 64506

Expression Profile of CPEB1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES YES YES hsa-let-7b-5p YES YES YES hsa-let-7c-5p YES YES YES hsa-let-7d-5p YES YES YES hsa-let-7e-5p YES YES YES hsa-let-7f-5p YES YES YES hsa-let-7g-5p YES YES YES hsa-let-7i-5p YES YES YES hsa-miR-1271-5p YES YES YES hsa-miR-130a-3p YES YES NO hsa-miR-130b-3p YES YES NO hsa-miR-182-5p YES NO YES hsa-miR-214-3p YES YES NO hsa-miR-22-3p YES YES YES hsa-miR-301a-3p YES YES NO hsa-miR-301b-3p YES YES NO hsa-miR-320a YES YES YES hsa-miR-320b YES YES YES hsa-miR-320c YES YES YES hsa-miR-320d YES YES YES hsa-miR-377-3p YES YES YES hsa-miR-425-5p YES YES YES hsa-miR-431-5p YES YES NO hsa-miR-448 YES YES NO hsa-miR-454-3p YES YES NO hsa-miR-455-5p YES YES NO hsa-miR-9-5p YES NO YES hsa-miR-96-5p YES YES YES hsa-miR-98-5p YES YES YES Display: