ctcRbase

Entry Detail

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General Information

Database ID: SKCM05041 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: RABEP1 Full Name: rabaptin, RAB GTPase binding effector protein 1 Category: mRNA Synonyms: RAB5EP|RABPT5 Chromosome: chr17 Strand: + Coordinate: Start Site(bp): 5282265 End Site(bp): 5385812 Gene Summary: NA External Links: Ensembl ID: ENSG00000029725 HGNC ID: HGNC:17677 Entrez Gene: 9135

Expression Profile of RABEP1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES YES NO hsa-let-7b-5p YES YES NO hsa-let-7c-5p YES YES NO hsa-let-7d-5p YES YES NO hsa-let-7f-5p YES YES NO hsa-let-7g-5p YES YES NO hsa-let-7i-5p YES YES NO hsa-miR-101-3p YES YES NO hsa-miR-106a-5p YES YES YES hsa-miR-106b-5p YES YES YES hsa-miR-1197 YES NO YES hsa-miR-134-5p YES YES NO hsa-miR-143-3p YES YES NO hsa-miR-145-5p YES YES NO hsa-miR-155-5p YES YES NO hsa-miR-17-5p YES YES YES hsa-miR-186-5p YES YES NO hsa-miR-18a-5p YES YES NO hsa-miR-18b-5p YES YES NO hsa-miR-192-5p YES YES NO hsa-miR-199a-3p YES NO YES hsa-miR-199b-3p YES NO YES hsa-miR-200b-3p YES YES YES hsa-miR-200c-3p YES YES YES hsa-miR-205-5p YES YES NO hsa-miR-20a-5p YES YES YES hsa-miR-20b-5p YES YES YES hsa-miR-214-3p YES YES NO hsa-miR-215-5p YES YES NO hsa-miR-218-5p YES YES YES hsa-miR-29a-3p YES YES NO hsa-miR-29b-3p YES YES NO hsa-miR-29c-3p YES YES NO hsa-miR-302a-3p YES YES YES hsa-miR-302b-3p YES YES YES hsa-miR-302c-3p YES YES YES hsa-miR-302d-3p YES YES YES hsa-miR-302e YES YES YES hsa-miR-326 YES YES NO hsa-miR-329-3p YES YES NO hsa-miR-330-5p YES YES NO hsa-miR-362-3p YES YES NO hsa-miR-370-3p YES YES NO hsa-miR-371a-5p YES YES YES hsa-miR-372-3p YES YES YES hsa-miR-373-3p YES YES YES hsa-miR-377-3p YES YES NO hsa-miR-410-3p YES YES NO hsa-miR-429 YES YES YES hsa-miR-485-5p YES YES NO hsa-miR-488-3p YES YES YES hsa-miR-519d-3p YES YES YES hsa-miR-520a-3p YES YES YES hsa-miR-520b YES YES YES hsa-miR-520c-3p YES YES YES hsa-miR-520d-3p YES YES YES hsa-miR-520e YES YES YES hsa-miR-520f-3p YES NO YES hsa-miR-577 YES NO NO hsa-miR-582-5p YES NO YES hsa-miR-758-3p YES YES YES hsa-miR-873-5p YES YES NO hsa-miR-93-5p YES YES YES hsa-miR-98-5p YES YES NO Display: