ctcRbase

General Information

Database ID:	SKCM05071
Cancer Type:	melanoma
Dataset:	GSE38495
CTCs/CTM Isolation Method:	immunomagnetic purification

Gene Information

ncRNA Symbol:

LTN1

Full Name:

listerin E3 ubiquitin protein ligase 1

Category:

mRNA

Synonyms:

C21orf10|C21orf98|RNF160|ZNF294

Chromosome:

chr21

Strand:

Coordinate:

Start Site(bp):

28928144

End Site(bp):

28992956

Gene Summary:

Like most RING finger proteins, LTN1 functions as an E3 ubiquitin ligase (Chu et al., 2009 [PubMed 19196968]).[supplied by OMIM, Nov 2010]

External Links:

Expression Profile of LTN1 Gene

Regulatory Relationship

mRNA targets:

miRNA targets:

miRNA Name	PITA	miRanda	RNAhybrid
hsa-let-7a-5p	YES	YES	YES
hsa-let-7b-5p	YES	YES	YES
hsa-let-7c-5p	YES	YES	YES
hsa-let-7d-5p	YES	YES	YES
hsa-let-7e-5p	YES	YES	YES
hsa-let-7f-5p	YES	YES	YES
hsa-let-7g-5p	YES	YES	YES
hsa-let-7i-5p	YES	YES	YES
hsa-miR-101-3p	YES	YES	NO
hsa-miR-127-3p	YES	YES	NO
hsa-miR-132-3p	YES	YES	NO
hsa-miR-136-5p	YES	YES	NO
hsa-miR-143-3p	YES	YES	NO
hsa-miR-144-3p	YES	YES	NO
hsa-miR-149-5p	YES	YES	NO
hsa-miR-150-5p	YES	YES	NO
hsa-miR-155-5p	YES	YES	NO
hsa-miR-181a-5p	YES	YES	NO
hsa-miR-181b-5p	YES	YES	NO
hsa-miR-181c-5p	YES	YES	NO
hsa-miR-181d-5p	YES	YES	NO
hsa-miR-183-5p	YES	YES	NO
hsa-miR-186-5p	YES	YES	NO
hsa-miR-191-5p	YES	YES	NO
hsa-miR-196a-5p	YES	YES	YES
hsa-miR-196b-5p	YES	YES	YES
hsa-miR-19a-3p	YES	YES	NO
hsa-miR-19b-3p	YES	YES	NO
hsa-miR-200b-3p	YES	YES	NO
hsa-miR-200c-3p	YES	YES	NO
hsa-miR-212-3p	YES	YES	NO
hsa-miR-21-5p	YES	YES	NO
hsa-miR-217	YES	YES	NO
hsa-miR-300	YES	YES	NO
hsa-miR-30a-5p	YES	YES	NO
hsa-miR-30b-5p	YES	YES	NO
hsa-miR-30c-5p	YES	YES	NO
hsa-miR-30d-5p	YES	YES	NO
hsa-miR-30e-5p	YES	YES	NO
hsa-miR-330-3p	YES	NO	YES
hsa-miR-340-5p	YES	YES	NO
hsa-miR-361-5p	YES	YES	NO
hsa-miR-371a-5p	YES	YES	NO
hsa-miR-376c-3p	YES	YES	NO
hsa-miR-381-3p	YES	YES	NO
hsa-miR-429	YES	YES	NO
hsa-miR-495-3p	YES	YES	NO
hsa-miR-543	YES	YES	NO
hsa-miR-590-5p	YES	YES	NO
hsa-miR-876-5p	YES	YES	NO
hsa-miR-98-5p	YES	YES	YES

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