ctcRbase

Entry Detail

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General Information

Database ID: SKCM05088 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: POGK Full Name: pogo transposable element derived with KRAB domain Category: mRNA Synonyms: BASS2|KRBOX2|LST003 Chromosome: chr1 Strand: + Coordinate: Start Site(bp): 166839447 End Site(bp): 166856344 Gene Summary: The exact function of the protein encoded by this gene is not known. However, this gene product contains a KRAB domain (which is involved in protein-protein interactions) at the N-terminus, and a transposase domain at the C-terminus, suggesting that it may belong to the family of DNA-mediated transposons in human. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000143157 HGNC ID: HGNC:18800 Entrez Gene: 57645

Expression Profile of POGK Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES YES NO hsa-miR-124-3p YES NO YES hsa-miR-135a-5p YES YES YES hsa-miR-135b-5p YES YES YES hsa-miR-1-3p YES NO YES hsa-miR-140-5p YES YES YES hsa-miR-143-3p YES YES YES hsa-miR-145-5p YES NO YES hsa-miR-186-5p YES YES NO hsa-miR-194-5p YES YES NO hsa-miR-199a-5p YES NO YES hsa-miR-199b-5p YES NO YES hsa-miR-204-5p YES YES NO hsa-miR-206 YES NO YES hsa-miR-211-5p YES YES NO hsa-miR-218-5p YES YES NO hsa-miR-223-3p YES YES NO hsa-miR-22-3p YES YES YES hsa-miR-224-5p YES YES NO hsa-miR-299-3p YES YES YES hsa-miR-335-5p YES YES NO hsa-miR-371a-5p YES YES NO hsa-miR-374a-5p YES YES NO hsa-miR-374b-5p YES YES NO hsa-miR-383-5p YES YES NO hsa-miR-455-5p YES YES NO hsa-miR-491-5p YES YES YES hsa-miR-506-3p YES NO YES hsa-miR-613 YES NO YES hsa-miR-625-5p YES NO NO hsa-miR-653-5p YES YES NO hsa-miR-7-5p YES NO YES hsa-miR-760 YES NO YES Display: