ctcRbase

Entry Detail

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General Information

Database ID: SKCM05089 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: CRNKL1 Full Name: crooked neck pre-mRNA splicing factor 1 Category: mRNA Synonyms: CLF|CRN|Clf1|HCRN|MSTP021|SYF3 Chromosome: chr20 Strand: - Coordinate: Start Site(bp): 20034368 End Site(bp): 20056046 Gene Summary: The crooked neck (crn) gene of Drosophila is essential for embryogenesis and is thought to be involved in cell cycle progression and pre-mRNA splicing. A protein encoded by this human locus has been found to localize to pre-mRNA splicing complexes in the nucleus and is necessary for pre-mRNA splicing. Alternatively spliced transcript variants have been described. [provided by RefSeq, Jul 2013] External Links: Ensembl ID: ENSG00000101343 HGNC ID: HGNC:15762 Entrez Gene: 51340

Expression Profile of CRNKL1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-106a-5p YES YES NO hsa-miR-132-3p YES YES NO hsa-miR-141-3p YES YES NO hsa-miR-17-5p YES YES NO hsa-miR-200a-3p YES YES NO hsa-miR-212-3p YES YES NO hsa-miR-30a-5p YES YES NO hsa-miR-30b-5p YES YES NO hsa-miR-30c-5p YES YES NO hsa-miR-30d-5p YES YES NO hsa-miR-30e-5p YES YES NO hsa-miR-335-5p YES YES YES hsa-miR-340-5p YES YES YES hsa-miR-371a-5p YES YES NO hsa-miR-410-3p YES YES NO hsa-miR-495-3p YES YES NO Display: