ctcRbase

Entry Detail

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General Information

Database ID: SKCM05092 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: CLPX Full Name: caseinolytic mitochondrial matrix peptidase chaperone subunit Category: mRNA Synonyms: EPP2 Chromosome: chr15 Strand: - Coordinate: Start Site(bp): 65148219 End Site(bp): 65185342 Gene Summary: The protein encoded by this gene is part of a protease found in mitochondria. This protease is ATP-dependent and targets specific proteins for degradation. The protease consists of two heptameric rings of the CLPP catalytic subunit sandwiched between two hexameric rings of the chaperone subunit encoded by this gene. Targeted proteins are unwound by this protein and then passed on to the CLPP subunit for degradation. Two transcript variants, one protein-coding and the other non-protein coding, have been found for this gene. [provided by RefSeq, Nov 2015] External Links: Ensembl ID: ENSG00000166855 HGNC ID: HGNC:2088 Entrez Gene: 10845

Expression Profile of CLPX Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-139-5p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-194-5p YES YES NO hsa-miR-300 YES YES NO hsa-miR-320a YES YES NO hsa-miR-320b YES YES NO hsa-miR-320c YES YES NO hsa-miR-320d YES YES NO hsa-miR-33a-5p YES YES YES hsa-miR-33b-5p YES YES YES hsa-miR-361-5p YES YES NO hsa-miR-381-3p YES YES NO hsa-miR-384 YES YES NO hsa-miR-410-3p YES YES NO hsa-miR-532-5p YES NO YES hsa-miR-543 YES YES NO hsa-miR-599 YES YES NO Display: