Entry Detail



General Information

Database ID:SKCM05103
Cancer Type:melanoma
Dataset:GSE38495
CTCs/CTM Isolation Method:immunomagnetic purification



Gene Information

ncRNA Symbol:ATF6B
Full Name:activating transcription factor 6 beta
Category:mRNA
Synonyms:CREB-RP|CREBL1|G13
Chromosome:chr6
Strand:-
Coordinate:
Start Site(bp):32098176End Site(bp):32128253
Gene Summary:The protein encoded by this gene is a transcription factor in the unfolded protein response (UPR) pathway during ER stress. Either as a homodimer or as a heterodimer with ATF6-alpha, the encoded protein binds to the ER stress response element, interacting with nuclear transcription factor Y to activate UPR target genes. The protein is normally found in the membrane of the endoplasmic reticulum; however, under ER stress, the N-terminal cytoplasmic domain is cleaved from the rest of the protein and translocates to the nucleus. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Oct 2008]
External Links:
Ensembl ID:ENSG00000213676
HGNC ID:HGNC:2349
Entrez Gene:1388



Expression Profile of ATF6B Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-302a-3p
NO
YES
YES
hsa-miR-302b-3p
NO
YES
YES
hsa-miR-302c-3p
NO
YES
YES
hsa-miR-302d-3p
NO
YES
YES
hsa-miR-302e
NO
YES
YES
hsa-miR-372-3p
NO
YES
YES
hsa-miR-373-3p
NO
YES
YES
hsa-miR-520a-3p
NO
YES
YES
hsa-miR-520b
NO
YES
YES
hsa-miR-520c-3p
NO
YES
YES
hsa-miR-520d-3p
NO
YES
YES
hsa-miR-520e
NO
YES
YES
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