ctcRbase

Entry Detail

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General Information

Database ID: SKCM05112 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: REPS1 Full Name: RALBP1 associated Eps domain containing 1 Category: mRNA Synonyms: NBIA7|RALBP1 Chromosome: chr6 Strand: - Coordinate: Start Site(bp): 138903493 End Site(bp): 138988261 Gene Summary: This gene encodes a signaling adaptor protein with two EH domains that interacts with proteins that participate in signaling, endocytosis and cytoskeletal changes. The encoded protein has been found in association with intersectin 1 and Src homology 3-domain growth factor receptor-bound 2-like (endophilin) interacting protein 1 when intersectin 1 was isolated from clathrin-coated pits. The encoded protein has also been shown to interact with amphiphysin, a cytoplasmic protein at the surface of synaptic vesicles. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Mar 2014] External Links: Ensembl ID: ENSG00000135597 HGNC ID: HGNC:15578 Entrez Gene: 85021

Expression Profile of REPS1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-128-3p NO YES YES hsa-miR-134-5p YES YES NO hsa-miR-21-5p YES YES NO hsa-miR-27a-3p NO YES YES hsa-miR-27b-3p NO YES YES hsa-miR-300 YES YES NO hsa-miR-381-3p YES YES NO hsa-miR-409-3p YES NO YES hsa-miR-448 YES YES NO hsa-miR-495-3p YES YES YES hsa-miR-590-5p YES YES NO hsa-miR-653-5p YES YES NO Display: