ctcRbase

Entry Detail

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General Information

Database ID: SKCM05191 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: NSUN2 Full Name: NOP2/Sun RNA methyltransferase family member 2 Category: mRNA Synonyms: MISU|MRT5|SAKI|TRM4 Chromosome: chr5 Strand: - Coordinate: Start Site(bp): 6599239 End Site(bp): 6633291 Gene Summary: This gene encodes a methyltransferase that catalyzes the methylation of cytosine to 5-methylcytosine (m5C) at position 34 of intron-containing tRNA(Leu)(CAA) precursors. This modification is necessary to stabilize the anticodon-codon pairing and correctly translate the mRNA. Alternatively spliced transcript variants encoding different isoforms have been noted for this gene.[provided by RefSeq, Mar 2011] External Links: Ensembl ID: ENSG00000037474 HGNC ID: HGNC:25994 Entrez Gene: 54888

Expression Profile of NSUN2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-124-3p YES YES YES hsa-miR-136-5p YES YES NO hsa-miR-21-5p YES YES NO hsa-miR-217 YES YES NO hsa-miR-326 YES YES NO hsa-miR-329-3p YES YES NO hsa-miR-330-5p YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-362-3p YES YES NO hsa-miR-425-5p YES YES NO hsa-miR-506-3p YES YES NO hsa-miR-590-5p YES YES NO Display: