ctcRbase

Entry Detail

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General Information

Database ID: SKCM05241 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SCAMP4 Full Name: secretory carrier membrane protein 4 Category: mRNA Synonyms: SCAMP-4 Chromosome: chr19 Strand: + Coordinate: Start Site(bp): 1905214 End Site(bp): 1926013 Gene Summary: Secretory carrier membrane proteins (SCAMPs) are widely distributed integral membrane proteins implicated in membrane trafficking. Most SCAMPs (e.g., SCAMP1; MIM 606911) have N-terminal cytoplasmic NPF (arg-pro-phe) repeats, 4 central transmembrane regions, and a short C-terminal cytoplasmic tail. These SCAMPs likely have a role in endocytosis that is mediated by their NPF repeats. Other SCAMPs, such as SCAMP4, lack the NPF repeats and are therefore unlikely to function in endocytosis (summary by Fernandez-Chacon and Sudhof, 2000 [PubMed 11050114]).[supplied by OMIM, Feb 2011] External Links: Ensembl ID: ENSG00000227500 HGNC ID: HGNC:30385 Entrez Gene: 113178

Expression Profile of SCAMP4 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-124-3p YES YES YES hsa-miR-143-3p YES YES YES hsa-miR-214-3p YES YES NO hsa-miR-431-5p YES YES NO hsa-miR-494-3p YES YES NO hsa-miR-495-3p YES NO YES hsa-miR-506-3p YES YES NO Display: