ctcRbase

Entry Detail

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General Information

Database ID: SKCM05242 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: USP6NL Full Name: USP6 N-terminal like Category: mRNA Synonyms: RNTRE|TRE2NL|USP6NL-IT1 Chromosome: chr10 Strand: - Coordinate: Start Site(bp): 11453946 End Site(bp): 11611754 Gene Summary: NA External Links: Ensembl ID: ENSG00000148429 HGNC ID: HGNC:16858 Entrez Gene: 9712

Expression Profile of USP6NL Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES YES YES hsa-miR-103a-3p YES YES YES hsa-miR-107 YES YES YES hsa-miR-1271-5p YES YES YES hsa-miR-129-5p YES YES NO hsa-miR-139-5p YES YES NO hsa-miR-140-5p YES YES YES hsa-miR-142-3p YES YES YES hsa-miR-144-3p YES YES YES hsa-miR-151a-3p YES NO YES hsa-miR-153-3p YES YES NO hsa-miR-15a-5p YES YES YES hsa-miR-15b-5p YES YES YES hsa-miR-16-5p YES YES YES hsa-miR-181a-5p YES YES YES hsa-miR-181b-5p YES YES YES hsa-miR-181c-5p YES YES YES hsa-miR-181d-5p YES YES YES hsa-miR-182-5p YES YES YES hsa-miR-185-5p YES YES NO hsa-miR-194-5p YES YES NO hsa-miR-195-5p YES YES YES hsa-miR-200b-3p YES YES YES hsa-miR-200c-3p YES YES YES hsa-miR-210-3p YES YES YES hsa-miR-216b-5p YES YES NO hsa-miR-217 YES YES NO hsa-miR-221-3p YES YES YES hsa-miR-222-3p YES YES YES hsa-miR-223-3p YES YES YES hsa-miR-224-5p YES YES YES hsa-miR-23a-3p YES YES YES hsa-miR-23b-3p YES YES YES hsa-miR-27a-3p YES YES NO hsa-miR-27b-3p YES YES NO hsa-miR-29a-3p YES YES YES hsa-miR-29b-3p YES YES YES hsa-miR-29c-3p YES YES YES hsa-miR-323a-3p YES NO YES hsa-miR-324-5p YES YES YES hsa-miR-340-5p YES YES NO hsa-miR-378a-3p YES YES NO hsa-miR-382-5p YES YES NO hsa-miR-410-3p YES YES YES hsa-miR-422a YES YES NO hsa-miR-424-5p YES YES YES hsa-miR-429 YES YES YES hsa-miR-448 YES YES NO hsa-miR-494-3p YES YES NO hsa-miR-495-3p YES YES NO hsa-miR-497-5p YES YES YES hsa-miR-599 YES YES NO hsa-miR-96-5p YES YES YES Display: