ctcRbase

Entry Detail

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General Information

Database ID: SKCM05264 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: C9orf40 Full Name: chromosome 9 open reading frame 40 Category: mRNA Synonyms: - Chromosome: chr9 Strand: - Coordinate: Start Site(bp): 74946581 End Site(bp): 74952886 Gene Summary: NA External Links: Ensembl ID: ENSG00000135045 HGNC ID: HGNC:23433 Entrez Gene: 55071

Expression Profile of C9orf40 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES YES YES hsa-let-7b-5p YES YES YES hsa-let-7c-5p YES YES YES hsa-let-7d-5p YES YES YES hsa-let-7e-5p YES YES YES hsa-let-7f-5p YES YES YES hsa-let-7g-5p YES YES YES hsa-let-7i-5p YES YES YES hsa-miR-106a-5p YES YES NO hsa-miR-106b-5p YES YES NO hsa-miR-10a-5p YES YES NO hsa-miR-10b-5p YES YES NO hsa-miR-129-5p YES YES NO hsa-miR-1297 YES YES NO hsa-miR-139-5p YES YES NO hsa-miR-143-3p YES YES NO hsa-miR-149-5p YES YES NO hsa-miR-153-3p YES YES YES hsa-miR-17-5p YES YES NO hsa-miR-193a-3p YES YES NO hsa-miR-193b-3p YES YES NO hsa-miR-196a-5p YES YES NO hsa-miR-196b-5p YES YES NO hsa-miR-199a-3p YES NO YES hsa-miR-199b-3p YES NO YES hsa-miR-204-5p YES YES NO hsa-miR-20a-5p YES YES NO hsa-miR-20b-5p YES YES NO hsa-miR-211-5p YES YES NO hsa-miR-216b-5p YES YES NO hsa-miR-223-3p YES YES NO hsa-miR-26a-5p YES YES NO hsa-miR-26b-5p YES YES NO hsa-miR-302a-3p YES YES NO hsa-miR-302b-3p YES YES NO hsa-miR-302c-3p YES YES NO hsa-miR-302d-3p YES YES NO hsa-miR-302e YES YES NO hsa-miR-320a YES YES NO hsa-miR-320b YES YES NO hsa-miR-320c YES YES NO hsa-miR-320d YES YES NO hsa-miR-339-5p YES YES NO hsa-miR-342-3p YES YES NO hsa-miR-372-3p YES YES NO hsa-miR-373-3p YES YES NO hsa-miR-376c-3p YES YES NO hsa-miR-379-5p YES YES NO hsa-miR-410-3p YES YES NO hsa-miR-448 YES NO YES hsa-miR-485-5p YES YES NO hsa-miR-495-3p YES YES NO hsa-miR-519d-3p YES YES NO hsa-miR-520a-3p YES YES NO hsa-miR-520b YES YES NO hsa-miR-520c-3p YES YES NO hsa-miR-520d-3p YES YES NO hsa-miR-520e YES YES NO hsa-miR-653-5p YES YES NO hsa-miR-93-5p YES YES NO hsa-miR-98-5p YES YES YES Display: