ctcRbase

Entry Detail

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General Information

Database ID: SKCM05294 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: HMGCS1 Full Name: 3-hydroxy-3-methylglutaryl-CoA synthase 1 Category: mRNA Synonyms: HMGCS Chromosome: chr5 Strand: - Coordinate: Start Site(bp): 43289395 End Site(bp): 43313512 Gene Summary: NA External Links: Ensembl ID: ENSG00000112972 HGNC ID: HGNC:5007 Entrez Gene: 3157

Expression Profile of HMGCS1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7g-5p YES YES NO hsa-let-7i-5p YES YES NO hsa-miR-129-2-3p YES NO YES hsa-miR-141-3p YES YES YES hsa-miR-142-5p YES NO YES hsa-miR-155-5p YES YES YES hsa-miR-18a-5p YES YES YES hsa-miR-18b-5p YES YES YES hsa-miR-199a-5p YES YES NO hsa-miR-199b-5p YES YES NO hsa-miR-19a-3p YES YES YES hsa-miR-19b-3p YES YES YES hsa-miR-200a-3p YES YES YES hsa-miR-210-3p YES YES NO hsa-miR-223-3p YES NO YES hsa-miR-224-5p YES YES NO hsa-miR-23a-3p YES YES NO hsa-miR-23b-3p YES YES NO hsa-miR-27a-3p YES YES YES hsa-miR-27b-3p YES YES YES hsa-miR-29a-3p YES YES YES hsa-miR-29b-3p YES YES YES hsa-miR-29c-3p YES YES YES hsa-miR-323a-3p YES NO YES hsa-miR-335-5p YES YES NO hsa-miR-34a-5p YES YES NO hsa-miR-34c-5p YES YES NO hsa-miR-365a-3p YES YES YES hsa-miR-375 YES YES NO hsa-miR-378a-3p YES YES NO hsa-miR-422a YES YES NO hsa-miR-431-5p YES YES NO hsa-miR-449a YES YES NO hsa-miR-449b-5p YES YES NO hsa-miR-494-3p YES YES YES hsa-miR-495-3p YES YES NO hsa-miR-496 YES YES NO hsa-miR-501-3p YES NO YES hsa-miR-502-3p YES NO YES hsa-miR-543 YES YES NO hsa-miR-599 YES YES NO hsa-miR-653-5p YES YES NO hsa-miR-873-5p YES YES NO hsa-miR-874-3p YES YES YES Display: