ctcRbase

Entry Detail

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General Information

Database ID: SKCM05311 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: TRMT6 Full Name: tRNA methyltransferase 6 Category: mRNA Synonyms: CGI-09|GCD10|Gcd10p Chromosome: chr20 Strand: - Coordinate: Start Site(bp): 5937235 End Site(bp): 5950558 Gene Summary: This gene encodes a member of the tRNA methyltransferase 6 protein family. A similar protein in yeast is part of a two component methyltransferase, which is involved in the posttranslational modification that produces the modified nucleoside 1-methyladenosine in tRNAs. Modified 1-methyladenosine influences initiator methionine stability and may be involved in the replication of human immunodeficiency virus type 1. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jul 2013] External Links: Ensembl ID: ENSG00000089195 HGNC ID: HGNC:20900 Entrez Gene: 51605

Expression Profile of TRMT6 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-137 YES YES YES hsa-miR-155-5p YES YES NO hsa-miR-182-5p YES YES NO hsa-miR-183-5p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-190a-5p YES YES NO hsa-miR-190b YES YES NO hsa-miR-191-5p YES YES NO hsa-miR-21-5p YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-342-3p YES YES YES hsa-miR-365a-3p YES YES NO hsa-miR-377-3p YES NO YES hsa-miR-431-5p YES YES NO hsa-miR-495-3p YES YES NO hsa-miR-496 YES YES NO hsa-miR-505-3p YES YES NO hsa-miR-590-5p YES YES NO hsa-miR-653-5p YES YES NO Display: