ctcRbase

Entry Detail

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General Information

Database ID: SKCM05315 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: KDM5A Full Name: lysine demethylase 5A Category: mRNA Synonyms: RBBP-2|RBBP2|RBP2 Chromosome: chr12 Strand: - Coordinate: Start Site(bp): 280129 End Site(bp): 389454 Gene Summary: This gene encodes a member of the Jumonji, AT-rich interactive domain 1 (JARID1) histone demethylase protein family. The encoded protein plays a role in gene regulation through the histone code by specifically demethylating lysine 4 of histone H3. The encoded protein interacts with many other proteins, including retinoblastoma protein, and is implicated in the transcriptional regulation of Hox genes and cytokines. This gene may play a role in tumor progression. [provided by RefSeq, Aug 2013] External Links: Ensembl ID: ENSG00000073614 HGNC ID: HGNC:9886 Entrez Gene: 5927

Expression Profile of KDM5A Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES NO YES hsa-miR-10a-5p YES YES NO hsa-miR-1197 YES NO YES hsa-miR-1252-5p YES NO NO hsa-miR-1271-5p YES NO YES hsa-miR-129-5p YES NO YES hsa-miR-132-3p YES YES YES hsa-miR-134-5p YES NO YES hsa-miR-135a-5p YES NO YES hsa-miR-135b-5p YES NO YES hsa-miR-138-5p YES NO YES hsa-miR-140-5p YES NO YES hsa-miR-144-3p YES YES NO hsa-miR-148a-3p YES NO YES hsa-miR-148b-3p YES NO YES hsa-miR-152-3p YES NO YES hsa-miR-153-3p YES YES YES hsa-miR-155-5p YES YES NO hsa-miR-181a-5p YES NO YES hsa-miR-181b-5p YES NO YES hsa-miR-181c-5p YES NO YES hsa-miR-181d-5p YES NO YES hsa-miR-182-5p YES YES YES hsa-miR-190a-5p YES YES NO hsa-miR-190b YES YES NO hsa-miR-194-5p YES YES YES hsa-miR-196a-5p YES YES YES hsa-miR-196b-5p YES YES YES hsa-miR-199a-3p YES NO YES hsa-miR-199b-3p YES NO YES hsa-miR-200b-3p YES YES NO hsa-miR-200c-3p YES YES NO hsa-miR-212-3p YES YES YES hsa-miR-216a-5p YES NO YES hsa-miR-216b-5p YES NO YES hsa-miR-218-5p YES YES YES hsa-miR-24-3p YES YES YES hsa-miR-28-3p YES NO YES hsa-miR-299-3p YES YES YES hsa-miR-29a-3p YES NO YES hsa-miR-29b-3p YES NO YES hsa-miR-29c-3p YES NO YES hsa-miR-320a YES NO YES hsa-miR-320b YES NO YES hsa-miR-320c YES NO YES hsa-miR-320d YES NO YES hsa-miR-371a-5p YES NO YES hsa-miR-377-3p YES YES NO hsa-miR-421 YES NO YES hsa-miR-429 YES YES NO hsa-miR-431-5p YES NO YES hsa-miR-448 YES NO YES hsa-miR-495-3p YES YES NO hsa-miR-543 YES YES YES hsa-miR-653-5p YES YES NO hsa-miR-655-3p YES NO YES hsa-miR-7-5p YES YES NO hsa-miR-876-5p YES NO YES hsa-miR-96-5p YES NO YES Display: