Entry Detail



General Information

Database ID:SKCM05328
Cancer Type:melanoma
Dataset:GSE38495
CTCs/CTM Isolation Method:immunomagnetic purification



Gene Information

ncRNA Symbol:BDP1
Full Name:B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB
Category:mRNA
Synonyms:HSA238520|TAF3B1|TFC5|TFIIIB''|TFIIIB150|TFIIIB90|TFNR
Chromosome:chr5
Strand:+
Coordinate:
Start Site(bp):71455615End Site(bp):71567820
Gene Summary:The product of this gene is a subunit of the TFIIIB transcription initiation complex, which recruits RNA polymerase III to target promoters in order to initiate transcription. The encoded protein localizes to concentrated aggregates in the nucleus, and is required for transcription from all three types of polymerase III promoters. It is phosphorylated by casein kinase II during mitosis, resulting in its release from chromatin and suppression of polymerase III transcription. [provided by RefSeq, Jul 2008]
External Links:
Ensembl ID:ENSG00000145734
HGNC ID:HGNC:13652
Entrez Gene:55814



Expression Profile of BDP1 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-137
NO
YES
YES
hsa-miR-200b-3p
NO
YES
YES
hsa-miR-200c-3p
NO
YES
YES
hsa-miR-30a-5p
NO
YES
YES
hsa-miR-30b-5p
NO
YES
YES
hsa-miR-30c-5p
NO
YES
YES
hsa-miR-30d-5p
NO
YES
YES
hsa-miR-30e-5p
NO
YES
YES
hsa-miR-340-5p
NO
YES
YES
hsa-miR-361-5p
NO
YES
YES
hsa-miR-429
NO
YES
YES
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