ctcRbase

Entry Detail

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General Information

Database ID: SKCM05334 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: USP1 Full Name: ubiquitin specific peptidase 1 Category: mRNA Synonyms: UBP Chromosome: chr1 Strand: + Coordinate: Start Site(bp): 62436297 End Site(bp): 62451804 Gene Summary: This gene encodes a member of the ubiquitin-specific processing (UBP) family of proteases that is a deubiquitinating enzyme (DUB) with His and Cys domains. This protein is located in the cytoplasm and cleaves the ubiquitin moiety from ubiquitin-fused precursors and ubiquitinylated proteins. The protein specifically deubiquitinates a protein in the Fanconi anemia (FA) DNA repair pathway. Alternate transcriptional splice variants have been characterized. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000162607 HGNC ID: HGNC:12607 Entrez Gene: 7398

Expression Profile of USP1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-124-3p YES YES YES hsa-miR-140-3p YES NO YES hsa-miR-150-5p YES YES NO hsa-miR-192-5p YES YES YES hsa-miR-215-5p YES YES YES hsa-miR-300 YES YES YES hsa-miR-340-5p YES NO YES hsa-miR-376c-3p YES YES YES hsa-miR-377-3p YES YES NO hsa-miR-381-3p YES YES YES hsa-miR-410-3p YES YES NO hsa-miR-506-3p YES YES NO hsa-miR-873-5p YES YES NO Display: