ctcRbase

Entry Detail

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General Information

Database ID: SKCM05335 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: CMTM3 Full Name: CKLF like MARVEL transmembrane domain containing 3 Category: mRNA Synonyms: BNAS2|CKLFSF3 Chromosome: chr16 Strand: + Coordinate: Start Site(bp): 66603874 End Site(bp): 66613892 Gene Summary: This gene belongs to the chemokine-like factor gene superfamily, a novel family that is similar to the chemokine and the transmembrane 4 superfamilies of signaling molecules. This gene is one of several chemokine-like factor genes located in a cluster on chromosome 16. Alternatively spliced transcript variants containing different 5' UTRs, but encoding the same protein, have been identified. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000140931 HGNC ID: HGNC:19174 Entrez Gene: 123920

Expression Profile of CMTM3 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-132-3p YES YES NO hsa-miR-135a-5p YES YES NO hsa-miR-135b-5p YES YES NO hsa-miR-137 YES YES NO hsa-miR-144-3p YES YES NO hsa-miR-149-5p YES YES YES hsa-miR-153-3p YES YES NO hsa-miR-212-3p YES YES NO hsa-miR-24-3p YES YES NO hsa-miR-362-3p YES YES NO hsa-miR-410-3p YES YES NO hsa-miR-448 YES YES NO Display: