ctcRbase

Entry Detail

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General Information

Database ID: SKCM05355 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SLC30A5 Full Name: solute carrier family 30 member 5 Category: mRNA Synonyms: ZNT5|ZNTL1|ZTL1|ZnT-5 Chromosome: chr5 Strand: + Coordinate: Start Site(bp): 69093646 End Site(bp): 69131069 Gene Summary: This gene encodes a member of the SLC30A/ZnT family of zinc transporter proteins. ZnT proteins mediate both cellular zinc efflux and zinc sequestration into membrane-bound organelles. The encoded protein plays a role in the early secretory pathway as a heterodimer with zinc transporter 6, and may also regulate zinc sequestration into secretory granules of pancreatic beta cells. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene, and a pseudogene of this gene is located on the long arm of chromosome 19. [provided by RefSeq, Oct 2011] External Links: Ensembl ID: ENSG00000145740 HGNC ID: HGNC:19089 Entrez Gene: 64924

Expression Profile of SLC30A5 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-129-5p YES YES NO hsa-miR-1298-5p YES NO YES hsa-miR-133a-3p YES YES YES hsa-miR-133b YES YES YES hsa-miR-143-3p YES YES NO hsa-miR-144-3p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-193a-5p YES NO YES hsa-miR-200b-3p YES YES YES hsa-miR-200c-3p YES YES YES hsa-miR-205-5p YES YES NO hsa-miR-217 YES NO NO hsa-miR-30a-5p YES YES YES hsa-miR-30b-5p YES YES YES hsa-miR-30c-5p YES YES YES hsa-miR-30d-5p YES YES YES hsa-miR-30e-5p YES YES YES hsa-miR-33a-5p YES YES NO hsa-miR-33b-5p YES YES NO hsa-miR-346 YES YES NO hsa-miR-371a-5p YES YES NO hsa-miR-384 YES YES NO hsa-miR-429 YES YES YES hsa-miR-485-5p YES YES NO Display: