ctcRbase

Entry Detail

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General Information

Database ID: SKCM05371 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: CDK16 Full Name: cyclin dependent kinase 16 Category: mRNA Synonyms: PCTAIRE|PCTAIRE1|PCTGAIRE|PCTK1 Chromosome: chrX Strand: + Coordinate: Start Site(bp): 47217860 End Site(bp): 47229997 Gene Summary: The protein encoded by this gene belongs to the cdc2/cdkx subfamily of the ser/thr family of protein kinases. It may play a role in signal transduction cascades in terminally differentiated cells; in exocytosis; and in transport of secretory cargo from the endoplasmic reticulum. This gene is thought to escape X inactivation. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Dec 2009] External Links: Ensembl ID: ENSG00000102225 HGNC ID: HGNC:8749 Entrez Gene: 5127

Expression Profile of CDK16 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-122-5p YES YES NO hsa-miR-125a-5p YES YES YES hsa-miR-125b-5p YES YES YES hsa-miR-137 YES YES NO hsa-miR-185-5p YES YES NO hsa-miR-200b-3p YES YES YES hsa-miR-200c-3p YES YES YES hsa-miR-214-3p YES YES NO hsa-miR-216a-5p YES YES NO hsa-miR-216b-5p YES YES NO hsa-miR-223-3p YES YES NO hsa-miR-24-3p YES YES NO hsa-miR-25-3p YES YES YES hsa-miR-29a-3p YES NO YES hsa-miR-29b-3p YES NO YES hsa-miR-29c-3p YES NO YES hsa-miR-324-5p YES YES YES hsa-miR-32-5p YES YES YES hsa-miR-331-3p YES NO YES hsa-miR-339-5p YES YES NO hsa-miR-33a-5p YES YES YES hsa-miR-33b-5p YES YES YES hsa-miR-363-3p YES YES YES hsa-miR-367-3p YES YES YES hsa-miR-370-3p YES YES YES hsa-miR-429 YES YES YES hsa-miR-485-5p YES NO YES hsa-miR-488-3p YES YES NO hsa-miR-494-3p YES YES NO hsa-miR-495-3p YES YES NO hsa-miR-532-3p YES NO YES hsa-miR-663a YES NO NO hsa-miR-873-5p YES YES YES hsa-miR-874-3p YES NO YES hsa-miR-92a-3p YES YES YES hsa-miR-92b-3p YES YES YES Display: