ctcRbase

Entry Detail

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General Information

Database ID: SKCM05419 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: EXTL3 Full Name: exostosin like glycosyltransferase 3 Category: mRNA Synonyms: BOTV|EXTL1L|EXTR1|ISDNA|REGR|RPR Chromosome: chr8 Strand: + Coordinate: Start Site(bp): 28600469 End Site(bp): 28755599 Gene Summary: This gene encodes a single-pass membrane protein which functions as a glycosyltransferase. The encoded protein catalyzes the transfer of N-acetylglucosamine to glycosaminoglycan chains. This reaction is important in heparin and heparan sulfate synthesis. Alternative splicing results in the multiple transcript variants. [provided by RefSeq, Nov 2012] External Links: Ensembl ID: ENSG00000012232 HGNC ID: HGNC:3518 Entrez Gene: 2137

Expression Profile of EXTL3 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES YES NO hsa-miR-124-3p YES NO YES hsa-miR-136-5p YES YES YES hsa-miR-143-3p YES YES NO hsa-miR-148a-3p YES NO YES hsa-miR-148b-3p YES NO YES hsa-miR-152-3p YES NO YES hsa-miR-15a-5p YES YES YES hsa-miR-15b-5p YES YES YES hsa-miR-16-5p YES YES YES hsa-miR-195-5p YES YES YES hsa-miR-199a-5p YES NO YES hsa-miR-199b-5p YES NO YES hsa-miR-214-3p YES NO NO hsa-miR-21-5p YES YES YES hsa-miR-218-5p YES NO YES hsa-miR-23a-3p YES YES NO hsa-miR-23b-3p YES YES NO hsa-miR-410-3p YES NO YES hsa-miR-421 YES YES NO hsa-miR-424-5p YES NO YES hsa-miR-497-5p YES YES YES hsa-miR-503-5p YES NO YES hsa-miR-541-3p YES NO NO hsa-miR-590-5p YES YES YES hsa-miR-654-5p YES NO NO hsa-miR-7-5p YES NO YES hsa-miR-874-3p YES NO YES hsa-miR-9-5p YES NO YES Display: