ctcRbase

Entry Detail

---



General Information

Database ID: SKCM05451 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: ARFGEF2 Full Name: ADP ribosylation factor guanine nucleotide exchange factor 2 Category: mRNA Synonyms: BIG2|PVNH2|dJ1164I10.1 Chromosome: chr20 Strand: + Coordinate: Start Site(bp): 48921890 End Site(bp): 49036693 Gene Summary: ADP-ribosylation factors (ARFs) play an important role in intracellular vesicular trafficking. The protein encoded by this gene is involved in the activation of ARFs by accelerating replacement of bound GDP with GTP and is involved in Golgi transport. It contains a Sec7 domain, which may be responsible for its guanine-nucleotide exchange activity and also brefeldin A inhibition. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000124198 HGNC ID: HGNC:15853 Entrez Gene: 10564

Expression Profile of ARFGEF2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES YES NO hsa-let-7b-5p YES YES NO hsa-let-7c-5p YES YES NO hsa-let-7d-5p YES YES NO hsa-let-7e-5p YES YES NO hsa-let-7f-5p YES YES NO hsa-let-7g-5p YES YES NO hsa-let-7i-5p YES YES NO hsa-miR-124-3p YES YES YES hsa-miR-135a-5p YES YES YES hsa-miR-135b-5p YES YES YES hsa-miR-138-5p YES YES YES hsa-miR-141-3p YES YES YES hsa-miR-154-5p YES YES NO hsa-miR-15a-5p YES YES NO hsa-miR-15b-5p YES YES NO hsa-miR-16-5p YES YES NO hsa-miR-181a-5p YES YES NO hsa-miR-181b-5p YES YES NO hsa-miR-181c-5p YES YES NO hsa-miR-181d-5p YES YES NO hsa-miR-18a-5p YES YES NO hsa-miR-18b-5p YES YES NO hsa-miR-190a-5p YES YES NO hsa-miR-190b YES YES NO hsa-miR-195-5p YES YES NO hsa-miR-200a-3p YES YES YES hsa-miR-214-3p YES YES NO hsa-miR-224-5p YES YES NO hsa-miR-24-3p YES YES NO hsa-miR-25-3p YES YES YES hsa-miR-27a-3p YES YES NO hsa-miR-27b-3p YES YES NO hsa-miR-29a-3p YES YES YES hsa-miR-29b-3p YES YES YES hsa-miR-29c-3p YES YES YES hsa-miR-320a YES YES YES hsa-miR-320b YES YES YES hsa-miR-320c YES NO YES hsa-miR-320d YES NO YES hsa-miR-32-5p YES YES YES hsa-miR-338-3p YES YES YES hsa-miR-361-5p YES YES NO hsa-miR-363-3p YES YES YES hsa-miR-367-3p YES YES YES hsa-miR-371a-5p YES YES NO hsa-miR-374a-5p YES YES NO hsa-miR-374b-5p YES YES NO hsa-miR-376c-3p YES NO YES hsa-miR-410-3p YES YES YES hsa-miR-411-5p YES YES NO hsa-miR-424-5p YES YES NO hsa-miR-489-3p YES NO YES hsa-miR-495-3p YES YES YES hsa-miR-497-5p YES YES NO hsa-miR-506-3p YES YES YES hsa-miR-543 YES YES NO hsa-miR-876-5p YES YES NO hsa-miR-92a-3p YES YES YES hsa-miR-92b-3p YES YES YES hsa-miR-9-5p YES YES YES hsa-miR-98-5p YES YES NO Display: