ctcRbase

Entry Detail

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General Information

Database ID: SKCM05481 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SMG5 Full Name: SMG5, nonsense mediated mRNA decay factor Category: mRNA Synonyms: EST1B|LPTS-RP1|LPTSRP1|SMG-5 Chromosome: chr1 Strand: - Coordinate: Start Site(bp): 156249224 End Site(bp): 156282825 Gene Summary: SMG5 is involved in nonsense-mediated mRNA decay (Ohnishi et al., 2003 [PubMed 14636577]).[supplied by OMIM, Mar 2008] External Links: Ensembl ID: ENSG00000198952 HGNC ID: HGNC:24644 Entrez Gene: 23381

Expression Profile of SMG5 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-125a-5p YES YES YES hsa-miR-125b-5p YES YES YES hsa-miR-182-5p YES YES YES hsa-miR-185-5p YES YES YES hsa-miR-210-3p YES YES NO hsa-miR-433-3p YES YES YES hsa-miR-488-3p YES YES NO hsa-miR-874-3p YES YES YES Display: