ctcRbase

Entry Detail

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General Information

Database ID: SKCM05521 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: EDC3 Full Name: enhancer of mRNA decapping 3 Category: mRNA Synonyms: LSM16|MRT50|YJDC|YJEFN2|hYjeF_N2-15q23 Chromosome: chr15 Strand: - Coordinate: Start Site(bp): 74630558 End Site(bp): 74696292 Gene Summary: This gene encodes a protein that is important in mRNA degradation. The encoded protein is a component of a decapping complex that promotes efficient removal of the monomethylguanosine (m7G) cap from mRNAs, as part of the 5' to 3' mRNA decay pathway. Mutations in this gene have been identified in human patients with an autosomal recessive form of intellectual disability. [provided by RefSeq, May 2017] External Links: Ensembl ID: ENSG00000179151 HGNC ID: HGNC:26114 Entrez Gene: 80153

Expression Profile of EDC3 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1271-5p YES YES NO hsa-miR-138-5p YES NO YES hsa-miR-139-5p YES YES YES hsa-miR-149-5p YES YES NO hsa-miR-185-5p YES YES NO hsa-miR-208b-3p YES YES NO hsa-miR-223-3p YES YES NO hsa-miR-22-3p YES YES YES hsa-miR-29a-3p YES NO YES hsa-miR-29b-3p YES NO YES hsa-miR-29c-3p YES NO YES hsa-miR-30a-5p YES YES YES hsa-miR-30b-5p YES YES YES hsa-miR-30c-5p YES YES YES hsa-miR-30d-5p YES YES YES hsa-miR-30e-5p YES YES YES hsa-miR-31-5p YES YES YES hsa-miR-342-3p YES NO YES hsa-miR-410-3p YES YES NO hsa-miR-495-3p YES YES NO hsa-miR-499a-5p YES YES NO hsa-miR-542-3p YES YES NO hsa-miR-875-5p YES YES NO hsa-miR-96-5p YES YES NO Display: