ctcRbase

Entry Detail

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General Information

Database ID: SKCM05609 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: WDHD1 Full Name: WD repeat and HMG-box DNA binding protein 1 Category: mRNA Synonyms: AND-1|AND1|CHTF4|CTF4 Chromosome: chr14 Strand: - Coordinate: Start Site(bp): 54938950 End Site(bp): 55027105 Gene Summary: The protein encoded by this gene contains multiple N-terminal WD40 domains and a C-terminal high mobility group (HMG) box. WD40 domains are found in a variety of eukaryotic proteins and may function as adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly. HMG boxes are found in many eukaryotic proteins involved in chromatin assembly, transcription and replication. Alternative splicing results in two transcript variants encoding different isoforms. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000198554 HGNC ID: HGNC:23170 Entrez Gene: 11169

Expression Profile of WDHD1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-340-5p YES YES YES hsa-miR-374a-5p YES YES NO hsa-miR-375 YES YES NO hsa-miR-488-3p YES YES NO hsa-miR-494-3p YES YES NO hsa-miR-497-5p YES YES NO Display: