ctcRbase

Entry Detail

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General Information

Database ID: SKCM05648 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: BTN2A1 Full Name: butyrophilin subfamily 2 member A1 Category: mRNA Synonyms: BK14H9.1|BT2.1|BTF1|BTN2.1|DJ3E1.1 Chromosome: chr6 Strand: + Coordinate: Start Site(bp): 26457904 End Site(bp): 26476621 Gene Summary: This gene encodes a member of the immunoglobulin superfamily. The gene is located in a cluster of butyrophilin-like genes in the juxta-telomeric region of the major histocompatibility complex on chromosome 6. A pseudogene of this gene has been identified in this cluster. The encoded protein is an integral plasma membrane protein involved in lipid, fatty-acid, and sterol metabolism. Alterations in this gene may be associated with several disease states including metabolic syndrome. Multiple alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2013] External Links: Ensembl ID: ENSG00000112763 HGNC ID: HGNC:1136 Entrez Gene: 11120

Expression Profile of BTN2A1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES YES NO hsa-let-7b-5p YES YES NO hsa-let-7c-5p YES YES NO hsa-let-7d-5p YES YES NO hsa-let-7e-5p YES YES NO hsa-let-7f-5p YES YES NO hsa-let-7g-5p YES YES NO hsa-let-7i-5p YES YES NO hsa-miR-200b-3p YES YES NO hsa-miR-200c-3p YES YES NO hsa-miR-214-3p YES YES NO hsa-miR-216a-5p YES YES NO hsa-miR-24-3p YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-342-3p YES YES YES hsa-miR-380-3p YES NO NO hsa-miR-410-3p YES YES NO hsa-miR-429 YES YES NO hsa-miR-543 YES YES NO hsa-miR-9-5p YES YES NO hsa-miR-98-5p YES YES NO Display: