ctcRbase

Entry Detail

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General Information

Database ID: SKCM05709 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SPAG16 Full Name: sperm associated antigen 16 Category: mRNA Synonyms: PF20|WDR29 Chromosome: chr2 Strand: + Coordinate: Start Site(bp): 213284379 End Site(bp): 214410501 Gene Summary: Cilia and flagella are comprised of a microtubular backbone, the axoneme, which is organized by the basal body and surrounded by plasma membrane. SPAG16 encodes 2 major proteins that associate with the axoneme of sperm tail and the nucleus of postmeiotic germ cells, respectively (Zhang et al., 2007 [PubMed 17699735]).[supplied by OMIM, Jul 2008] External Links: Ensembl ID: ENSG00000144451 HGNC ID: HGNC:23225 Entrez Gene: 79582

Expression Profile of SPAG16 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-181a-5p YES YES NO hsa-miR-181b-5p YES YES NO hsa-miR-181c-5p YES YES NO hsa-miR-181d-5p YES YES NO hsa-miR-204-5p YES YES NO hsa-miR-211-5p YES YES NO hsa-miR-23a-3p YES YES NO hsa-miR-23b-3p YES YES NO hsa-miR-326 YES YES NO hsa-miR-330-5p YES YES NO hsa-miR-342-3p YES YES NO Display: