ctcRbase

Entry Detail

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General Information

Database ID: SKCM05771 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: USF2 Full Name: upstream transcription factor 2, c-fos interacting Category: mRNA Synonyms: FIP|bHLHb12 Chromosome: chr19 Strand: + Coordinate: Start Site(bp): 35268978 End Site(bp): 35279821 Gene Summary: This gene encodes a member of the basic helix-loop-helix leucine zipper family of transcription factors. The encoded protein can activate transcription through pyrimidine-rich initiator (Inr) elements and E-box motifs and is involved in regulating multiple cellular processes. [provided by RefSeq, Mar 2016] External Links: Ensembl ID: ENSG00000105698 HGNC ID: HGNC:12594 Entrez Gene: 7392

Expression Profile of USF2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-10a-5p YES YES YES hsa-miR-10b-5p YES YES YES hsa-miR-129-5p YES YES YES hsa-miR-137 YES YES YES hsa-miR-186-5p YES YES YES hsa-miR-25-3p YES YES YES hsa-miR-32-5p YES YES YES hsa-miR-329-3p YES NO NO hsa-miR-339-5p YES YES YES hsa-miR-362-3p YES NO NO hsa-miR-363-3p YES YES YES hsa-miR-367-3p YES YES YES hsa-miR-423-5p YES NO YES hsa-miR-541-3p YES NO NO hsa-miR-654-5p YES NO NO hsa-miR-875-5p YES YES YES hsa-miR-92a-3p YES YES YES hsa-miR-92b-3p YES YES YES Display: