ctcRbase

Entry Detail

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General Information

Database ID: SKCM05787 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: FAM219A Full Name: family with sequence similarity 219 member A Category: mRNA Synonyms: C9orf25 Chromosome: chr9 Strand: - Coordinate: Start Site(bp): 34398184 End Site(bp): 34458570 Gene Summary: The protein encoded by this gene has homologs that have been identified in mouse, macaque, etc organisms. Multiple alternatively spliced transcript variants that encode different protein isoforms have been described for this gene. [provided by RefSeq, Dec 2010] External Links: Ensembl ID: ENSG00000164970 HGNC ID: HGNC:19920 Entrez Gene: 203259

Expression Profile of FAM219A Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES YES NO hsa-let-7b-5p YES YES NO hsa-let-7c-5p YES YES NO hsa-let-7d-5p YES YES NO hsa-let-7e-5p YES YES NO hsa-let-7f-5p YES YES NO hsa-let-7g-5p YES YES NO hsa-let-7i-5p YES YES NO hsa-miR-122-5p YES YES NO hsa-miR-143-3p YES YES NO hsa-miR-185-5p YES NO NO hsa-miR-200b-3p YES YES YES hsa-miR-200c-3p YES YES YES hsa-miR-217 YES YES NO hsa-miR-329-3p YES NO NO hsa-miR-34a-5p YES YES NO hsa-miR-34c-5p YES YES NO hsa-miR-362-3p YES NO NO hsa-miR-429 YES YES YES hsa-miR-449a YES YES NO hsa-miR-449b-5p YES YES NO hsa-miR-541-3p YES NO NO hsa-miR-654-5p YES NO NO hsa-miR-98-5p YES YES NO Display: