Entry Detail



General Information

Database ID:SKCM05796
Cancer Type:melanoma
Dataset:GSE38495
CTCs/CTM Isolation Method:immunomagnetic purification



Gene Information

ncRNA Symbol:SETMAR
Full Name:SET domain and mariner transposase fusion gene
Category:mRNA
Synonyms:METNASE|Mar1
Chromosome:chr3
Strand:+
Coordinate:
Start Site(bp):4303304End Site(bp):4317567
Gene Summary:This gene encodes a fusion protein that contains an N-terminal histone-lysine N-methyltransferase domain and a C-terminal mariner transposase domain. The encoded protein binds DNA and functions in DNA repair activities including non-homologous end joining and double strand break repair. The SET domain portion of this protein specifically methylates histone H3 lysines 4 and 36. This gene exists as a fusion gene only in anthropoid primates, other organisms lack mariner transposase domain. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Jan 2013]
External Links:
Ensembl ID:ENSG00000170364
HGNC ID:HGNC:10762
Entrez Gene:6419



Expression Profile of SETMAR Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:NA
Display:N/A