ctcRbase

Entry Detail

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General Information

Database ID: SKCM05805 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: EFHC1 Full Name: EF-hand domain containing 1 Category: mRNA Synonyms: EJM1|dJ304B14.2 Chromosome: chr6 Strand: + Coordinate: Start Site(bp): 52362123 End Site(bp): 52529886 Gene Summary: This gene encodes an EF-hand-containing calcium binding protein. The encoded protein likely plays a role in calcium homeostasis. Mutations in this gene have been associated with susceptibility to juvenile myoclonic epilepsy and juvenile absence epilepsy. Alternatively spliced transcript variants have been described. [provided by RefSeq, Feb 2010] External Links: Ensembl ID: ENSG00000096093 HGNC ID: HGNC:16406 Entrez Gene: 114327

Expression Profile of EFHC1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-106a-5p YES YES NO hsa-miR-106b-5p YES YES NO hsa-miR-10a-5p YES YES NO hsa-miR-10b-5p YES YES NO hsa-miR-122-5p YES YES NO hsa-miR-1323 YES NO NO hsa-miR-17-5p YES YES NO hsa-miR-181a-5p YES YES NO hsa-miR-181b-5p YES YES NO hsa-miR-181c-5p YES YES NO hsa-miR-181d-5p YES YES NO hsa-miR-20a-5p YES YES NO hsa-miR-20b-5p YES YES NO hsa-miR-361-5p YES YES NO hsa-miR-376c-3p YES YES NO hsa-miR-431-5p YES YES NO hsa-miR-490-3p YES YES NO hsa-miR-495-3p YES YES NO hsa-miR-519d-3p YES YES NO hsa-miR-548o-3p YES NO NO hsa-miR-873-5p YES YES NO hsa-miR-93-5p YES YES NO Display: