ctcRbase

Entry Detail

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General Information

Database ID: SKCM05858 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SMARCC2 Full Name: SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2 Category: mRNA Synonyms: BAF170|CRACC2|Rsc8 Chromosome: chr12 Strand: - Coordinate: Start Site(bp): 56162983 End Site(bp): 56189567 Gene Summary: The protein encoded by this gene is a member of the SWI/SNF family of proteins, whose members display helicase and ATPase activities and which are thought to regulate transcription of certain genes by altering the chromatin structure around those genes. The encoded protein is part of the large ATP-dependent chromatin remodeling complex SNF/SWI and contains a predicted leucine zipper motif typical of many transcription factors. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000139613 HGNC ID: HGNC:11105 Entrez Gene: 6601

Expression Profile of SMARCC2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-103a-3p YES YES NO hsa-miR-107 YES YES NO hsa-miR-129-2-3p YES NO YES hsa-miR-140-5p YES YES YES hsa-miR-199a-3p YES NO YES hsa-miR-199b-3p YES NO YES hsa-miR-28-5p YES YES YES hsa-miR-423-5p YES NO YES hsa-miR-708-5p YES YES YES Display: