Entry Detail



General Information

Database ID:SKCM05887
Cancer Type:melanoma
Dataset:GSE38495
CTCs/CTM Isolation Method:immunomagnetic purification



Gene Information

ncRNA Symbol:TWNK
Full Name:twinkle mtDNA helicase
Category:mRNA
Synonyms:ATXN8|C10orf2|IOSCA|MTDPS7|PEO|PEO1|PEOA3|PRLTS5|SANDO|SCA8|TWINL
Chromosome:chr10
Strand:+
Coordinate:
Start Site(bp):100987367End Site(bp):100994401
Gene Summary:This gene encodes a hexameric DNA helicase which unwinds short stretches of double-stranded DNA in the 5' to 3' direction and, along with mitochondrial single-stranded DNA binding protein and mtDNA polymerase gamma, is thought to play a key role in mtDNA replication. The protein localizes to the mitochondrial matrix and mitochondrial nucleoids. Mutations in this gene cause infantile onset spinocerebellar ataxia (IOSCA) and progressive external ophthalmoplegia (PEO) and are also associated with several mitochondrial depletion syndromes. Alternative splicing results in multiple transcript variants encoding distinct isoforms.[provided by RefSeq, Aug 2009]
External Links:
Ensembl ID:ENSG00000107815
HGNC ID:HGNC:1160
Entrez Gene:56652



Expression Profile of TWNK Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-221-3p
YES
YES
NO
hsa-miR-222-3p
YES
YES
NO
hsa-miR-24-3p
YES
YES
NO
hsa-miR-28-5p
YES
YES
NO
hsa-miR-491-5p
YES
YES
NO
hsa-miR-708-5p
YES
YES
NO
hsa-miR-9-5p
NO
YES
YES
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