ctcRbase

Entry Detail

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General Information

Database ID: SKCM05897 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: IGSF3 Full Name: immunoglobulin superfamily member 3 Category: mRNA Synonyms: EWI-3|LCDD|V8 Chromosome: chr1 Strand: - Coordinate: Start Site(bp): 116574399 End Site(bp): 116667755 Gene Summary: The protein encoded by this gene is an immunoglobulin-like membrane protein containing several V-type Ig-like domains. A mutation in this gene has been associated with bilateral nasolacrimal duct obstruction (LCDD). [provided by RefSeq, Jun 2016] External Links: Ensembl ID: ENSG00000143061 HGNC ID: HGNC:5950 Entrez Gene: 3321

Expression Profile of IGSF3 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES YES NO hsa-let-7b-5p YES YES NO hsa-let-7c-5p YES YES NO hsa-let-7e-5p YES YES NO hsa-let-7g-5p YES YES NO hsa-let-7i-5p YES YES NO hsa-miR-103a-3p YES YES YES hsa-miR-107 YES YES YES hsa-miR-125a-5p YES YES NO hsa-miR-1271-5p YES NO YES hsa-miR-128-3p YES YES YES hsa-miR-129-5p YES YES NO hsa-miR-130a-3p YES YES YES hsa-miR-130b-3p YES YES YES hsa-miR-134-5p YES YES NO hsa-miR-140-5p YES YES YES hsa-miR-182-5p YES YES YES hsa-miR-185-5p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-193a-3p YES NO YES hsa-miR-193b-3p YES NO YES hsa-miR-19a-3p YES YES YES hsa-miR-19b-3p YES YES YES hsa-miR-200b-3p YES YES YES hsa-miR-200c-3p YES YES YES hsa-miR-214-3p YES YES NO hsa-miR-221-3p YES NO YES hsa-miR-222-3p YES NO YES hsa-miR-223-3p YES YES NO hsa-miR-27a-3p YES YES NO hsa-miR-27b-3p YES YES NO hsa-miR-301a-3p YES YES YES hsa-miR-301b-3p YES YES YES hsa-miR-323a-3p YES NO YES hsa-miR-330-3p YES NO YES hsa-miR-34a-5p YES YES NO hsa-miR-34c-5p YES YES NO hsa-miR-361-5p YES YES NO hsa-miR-376a-3p YES YES YES hsa-miR-376b-3p YES YES YES hsa-miR-376c-3p YES YES NO hsa-miR-384 YES YES NO hsa-miR-410-3p YES NO YES hsa-miR-411-5p YES YES NO hsa-miR-421 YES YES YES hsa-miR-429 YES YES YES hsa-miR-449a YES YES NO hsa-miR-449b-5p YES YES NO hsa-miR-454-3p YES YES YES hsa-miR-486-5p YES YES NO hsa-miR-496 YES YES NO hsa-miR-7-5p YES YES NO hsa-miR-876-5p YES YES NO hsa-miR-96-5p YES NO YES hsa-miR-98-5p YES YES NO Display: