ctcRbase

Entry Detail

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General Information

Database ID: SKCM05938 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: IER5 Full Name: immediate early response 5 Category: mRNA Synonyms: SBBI48 Chromosome: chr1 Strand: + Coordinate: Start Site(bp): 181088712 End Site(bp): 181092899 Gene Summary: This gene encodes a protein that is similar to other immediate early response proteins. In the mouse, a similar gene may play an important role in mediating the cellular response to mitogenic signals. Studies in rats found the expression of a similar gene to be increased after waking and sleep deprivation. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000162783 HGNC ID: HGNC:5393 Entrez Gene: 51278

Expression Profile of IER5 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-136-5p YES YES NO hsa-miR-185-5p YES YES NO hsa-miR-192-5p YES YES YES hsa-miR-200b-3p YES YES YES hsa-miR-200c-3p YES YES YES hsa-miR-215-5p YES YES YES hsa-miR-216b-5p YES YES NO hsa-miR-300 YES NO YES hsa-miR-30c-5p YES NO YES hsa-miR-339-5p YES YES YES hsa-miR-340-5p YES YES NO hsa-miR-346 YES YES YES hsa-miR-361-5p YES YES NO hsa-miR-381-3p YES NO YES hsa-miR-384 YES YES NO hsa-miR-429 YES YES YES hsa-miR-491-5p YES YES NO hsa-miR-495-3p YES YES NO hsa-miR-655-3p YES NO YES Display: