ctcRbase

Entry Detail

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General Information

Database ID: SKCM06054 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: PKNOX1 Full Name: PBX/knotted 1 homeobox 1 Category: mRNA Synonyms: PREP1|pkonx1c Chromosome: chr21 Strand: + Coordinate: Start Site(bp): 42974510 End Site(bp): 43033931 Gene Summary: NA External Links: Ensembl ID: ENSG00000160199 HGNC ID: HGNC:9022 Entrez Gene: 5316

Expression Profile of PKNOX1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES NO YES hsa-miR-106a-5p YES YES YES hsa-miR-106b-5p YES YES YES hsa-miR-129-5p YES YES YES hsa-miR-144-3p YES YES YES hsa-miR-17-5p YES YES YES hsa-miR-19a-3p YES YES YES hsa-miR-19b-3p YES YES YES hsa-miR-20a-5p YES YES YES hsa-miR-20b-5p YES YES YES hsa-miR-219a-5p YES YES YES hsa-miR-223-3p YES YES YES hsa-miR-23a-3p YES YES YES hsa-miR-23b-3p YES YES YES hsa-miR-29a-3p YES YES NO hsa-miR-29b-3p YES YES NO hsa-miR-29c-3p YES YES NO hsa-miR-30a-5p YES YES NO hsa-miR-30b-5p YES YES NO hsa-miR-30c-5p YES YES NO hsa-miR-30d-5p YES YES NO hsa-miR-30e-5p YES YES NO hsa-miR-329-3p YES NO NO hsa-miR-338-3p YES YES YES hsa-miR-340-5p YES YES YES hsa-miR-362-3p YES NO NO hsa-miR-410-3p YES YES NO hsa-miR-488-3p YES NO YES hsa-miR-494-3p YES NO YES hsa-miR-519d-3p YES YES YES hsa-miR-582-5p YES NO YES hsa-miR-93-5p YES YES YES Display: