ctcRbase

Entry Detail

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General Information

Database ID: SKCM06172 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: TSEN54 Full Name: tRNA splicing endonuclease subunit 54 Category: mRNA Synonyms: PCH2A|PCH4|PCH5|SEN54L|sen54 Chromosome: chr17 Strand: + Coordinate: Start Site(bp): 75516060 End Site(bp): 75524739 Gene Summary: This gene encodes a subunit of the tRNA splicing endonuclease complex, which catalyzes the removal of introns from precursor tRNAs. The complex is also implicated in pre-mRNA 3-prime end processing. Mutations in this gene result in pontocerebellar hypoplasia type 2.[provided by RefSeq, Oct 2009] External Links: Ensembl ID: ENSG00000182173 HGNC ID: HGNC:27561 Entrez Gene: 283989

Expression Profile of TSEN54 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-124-3p YES YES YES hsa-miR-125a-5p YES YES YES hsa-miR-125b-5p YES YES YES hsa-miR-135a-5p YES YES YES hsa-miR-135b-5p YES YES YES hsa-miR-193a-3p YES YES NO hsa-miR-193b-3p YES YES NO hsa-miR-214-3p YES YES NO hsa-miR-27a-3p YES YES NO hsa-miR-27b-3p YES YES NO hsa-miR-506-3p YES YES NO hsa-miR-9-5p YES YES NO Display: